celtSTEM Research Collaborative: Graph Neural Nets
A collaborative project between the University of St. Thomas - Houston and Rice University to establish a sustainable initiative to foster computational research, addressing the call to prepare a diverse an inclusive STEM workforce by increasing interest and competencies in undergraduate research.Â
This research involves the departments of Mathematics and Computer Science (UST), Biology (UST) and Computer Science (Rice) to address foundational questions in the area of large-scale graph processing using graph neural nets. Relational database technology will be adapted to perform distributed neural computations over huge graphs, which will be applied to tackle two problems in biology: 1) Metagenomic analyses of mosquitoes genetic sequences to discover viruses carried by mosquitos in Houston, and b) protein motif and structural analysis to discover cell functionality.
This material is based upon work supported by the National Science Foundation under Grant No. 2131293. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
Carlos Monroy
PI - Computer Science
UST
Maia Larios-Sanz
Co-PI - Biology
UST
Albert Ribes-Zamora
Co-PI - Biology
UST
Chris Jermaine
Co-PI - Computer Science
Rice University
Luay Nakhleh
Co-PI - Computer Science
Rice University
Undergraduate Student Researchers
Maria Bello
Undergraduate Researcher
(1/22 - present)
Carolina Carbajal
Undergraduate Researcher
(5/22 - present)
Jarvin Chavez
Undergraduate Researcher
(1/23 - present)
Nafil Atiq
Undergraduate Researcher
(1/23 - present)
Ramiro Galvan
Undergraduate Researcher
(11/23 - present)
Joseph Troxler
Undergraduate Researcher
(12/23 - present)
Lynne Vu
Undergraduate Researcher
(1/24 - present)
Christopher Tran
Undergraduate Researcher
(5/24 - present)
Emma Luna
Undergraduate Researcher
(5/24 - present)
Je'lin Smith
Undergraduate Researcher
(5/24 - present)
Other faculty collaborators
Huw Ogilvie
Computer Science
Rice University
Amin Shivas
Biology - UST
Charles Thangaraj
Computer Science UST
Past collaborators
Izel Fernandez
Undergraduate Researcher
(1/22 - 5/22)
Samuel Escamilla
Undergraduate Researcher
(1/22 - 12/22)
Fernando Romero
Undergraduate Researcher
(1/22 - 12/22)
Ruben Ruiz
Undergraduate Researcher
(1/22 - 7/23)
Kate Coxic
Undergraduate Researcher
(1/22 - 12/23)
Benjamin Navarro
Undergraduate Researcher
(1/22 - 12/23)
Alix Rieser
Undergraduate Researcher
(1/23- 12/23)
Christopher Lama
Undergraduate Researcher
(10/22 - 5/24)